tfclass_predict.io_interface
============================

.. py:module:: tfclass_predict.io_interface


Classes
-------

.. autoapisummary::

   tfclass_predict.io_interface.IOInterface


Module Contents
---------------

.. py:class:: IOInterface(bed_file: str, genome_file: str, res_dir: str)

   .. py:attribute:: bed_file


   .. py:attribute:: file_name


   .. py:attribute:: genome_file


   .. py:attribute:: res_dir


   .. py:method:: read_atac_seq_data()

      Reads ATAC-seq regions from BED file that was given in the initalizer.
      :return: BED file input as pd.DataFrame.



   .. py:method:: write_predictions(counts_vec, pred_dict, bed_data)

      Writes predictions and count vectors to output files.
      :param counts_vec: Count vectors from Predictor.predict function.
      :param pred_dict: Dictionary from Predictor.predict function.
      :param bed_data: Dataframe from BED file.
      :return: